Co-expression analysis

Gene ID	1619278_at
Gene name	hypothetical protein LOC100260963
Homology with Arabidopsis	Similar to At1g36675: glycine-rich protein (HF=2e-1)
Module size	6 genes
NF	0.48
%ile	72.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.95	1619278_at	CB976494	hypothetical protein LOC100260963	-	2e-1	At1g36675	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1607428_at	CD801140	hypothetical protein LOC100268022	-	2e-2	At5g06980	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1607503_s_at	CF515267	hypothetical protein LOC100260521	-	5e-16	At1g28330	DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.95	1610056_s_at	CB341777	hypothetical protein LOC100256876 /// hypothetical protein LOC100261970 /// hypothetical protein LOC100266371	-	8e-3	At5g25280	serine-rich protein-related	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.94	1620071_at	BQ800214	hypothetical protein LOC100249385	-	3e-11	At5g27320	GID1C (GA INSENSITIVE DWARF1C)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.95	1618465_at	CB918507	hypothetical protein LOC100252099	-	2e-39	At5g14640	SK13 (SHAGGY-LIKE KINASE 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.9	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.8	86.0	GSM147672	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	1
1.8	86.0	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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