Co-expression analysis

Gene ID	1619271_at
Gene name	hypothetical protein LOC100247619
Homology with Arabidopsis	Similar to At5g56100: glycine-rich protein / oleosin (HF=1e+0)
Module size	6 genes
NF	0.89
%ile	99.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1619271_at	CB981487	hypothetical protein LOC100247619	-	1e+0	At5g56100	glycine-rich protein / oleosin	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.96	1608839_at	CF510749	hypothetical protein LOC100247619	-	2e-2	At5g25750	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.95	1616795_at	CA813984	hypothetical LOC100248029	-	4e-9	At1g67230	LINC1 (LITTLE NUCLEI1)	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.95	1621467_at	CA817542	hypothetical protein LOC100242259	-	3e-1	At2g30420	ETC2	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.97	1611989_at	CF209510	hypothetical protein LOC100244518	-	2e-89	At5g06600	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1618431_at	CA817390	hypothetical protein LOC100253034	-	3e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436404	V. riparia (VR, PI588259) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage