Co-expression analysis

Gene ID	1619250_at
Gene name
Homology with Arabidopsis	Similar to At3g55280: RPL23AB (RIBOSOMAL PROTEIN L23AB) (HF=1e+0)
Module size	6 genes
NF	0.55
%ile	81.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.98	1619250_at	CF511091	-	-	1e+0	At3g55280	RPL23AB (RIBOSOMAL PROTEIN L23AB)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1613187_at	CF214063	hypothetical protein LOC100257160	-	4e-6	At3g56720	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1617543_at	BQ794677	hypothetical protein LOC100246698	-	2e-8	At3g26850	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1613762_at	CF404411	hypothetical protein LOC100256306	-	5e-3	At2g04880	ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1612922_at	BQ795022	similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3); transcription factor	-	1e+0	At1g02510	TPK4	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.99	1607940_at	BQ800262	hypothetical protein LOC100261463	-	6e-1	At1g69470	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.6	96.0	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.1	94.6	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.0	94.2	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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