Co-expression analysis

Gene ID 1619232_at
Gene name hypothetical protein LOC100248696
Homology with ArabidopsisSimilar to At3g06420: ATG8H (autophagy 8h) (HF=6e-6)
Module size 9 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.60.981619232_atCA817187hypothetical protein LOC100248696-6e-6At3g06420ATG8H (autophagy 8h)O.I.H.G.S.X.
0.6081.90.981615588_atBQ796822hypothetical protein LOC100241835-1e-17At3g62580-O.I.H.G.S.X.
0.5779.80.981608130_atCF207500hypothetical protein LOC100248764-2e-4At3g57030strictosidine synthase family proteinO.I.H.G.S.X.
0.5273.90.981611449_atCD797700hypothetical protein LOC100251803-6e-9At5g47710C2 domain-containing proteinO.I.H.G.S.X.
0.4868.80.981610475_atCB979928hypothetical protein LOC100242577-1e-7At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.4767.70.981608420_atBQ795023hypothetical protein LOC100247793-8e-86At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.
0.4666.50.971616936_s_atCF519064hypothetical protein LOC100241172-3e-8At1g61065unknown proteinO.I.H.G.S.X.
0.4464.10.981612136_atCF514670--3e-17At5g55850NOIO.I.H.G.S.X.
0.4464.10.981615976_atCF517016hypothetical protein LOC100247651-2e-113At2g33150PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.796.2GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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