Co-expression analysis

Gene ID	1619210_at
Gene name	Cu/Zn superoxide dismutase-like
Homology with Arabidopsis	Similar to At2g28190: CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) (HF=9e-46)
Module size	6 genes
NF	0.06
%ile	12.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	79.4	0.89	1619210_at	AF056622.1	Cu/Zn superoxide dismutase-like	-	9e-46	At2g28190	CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.88	1608014_at	CF512552	hypothetical protein LOC100249623	-	7e-14	At1g78955	CAMS1 (Camelliol C synthase 1)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.89	1609526_at	CF210472	hypothetical protein LOC100261349	-	2e+0	At5g47520	AtRABA5a (Arabidopsis Rab GTPase homolog A5a)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.89	1621822_at	CF516639	hypothetical protein LOC100263358	-	6e-7	At1g12520	ATCCS (COPPER CHAPERONE FOR SOD1)	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.89	1606951_at	CF513249	hypothetical protein LOC100257242	-	1e+0	At5g19450	CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.90	1606536_at	CB971452	hypothetical protein LOC100249578	-	1e+0	At2g43720	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.7	96.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.7	96.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.3	95.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.0	94.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.9	93.8	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.3	90.7	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.3	90.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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