Co-expression analysis

Gene ID 1619210_at
Gene name Cu/Zn superoxide dismutase-like
Homology with ArabidopsisSimilar to At2g28190: CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) (HF=9e-46)
Module size 6 genes
NF 0.06
%ile 12.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5679.40.891619210_atAF056622.1Cu/Zn superoxide dismutase-like-9e-46At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.
0.6081.90.881608014_atCF512552hypothetical protein LOC100249623-7e-14At1g78955CAMS1 (Camelliol C synthase 1)O.I.H.G.S.X.
0.5679.40.891609526_atCF210472hypothetical protein LOC100261349-2e+0At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)O.I.H.G.S.X.
0.045.20.891621822_atCF516639hypothetical protein LOC100263358-6e-7At1g12520ATCCS (COPPER CHAPERONE FOR SOD1)O.I.H.G.S.X.
0.034.20.891606951_atCF513249hypothetical protein LOC100257242-1e+0At5g19450CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)O.I.H.G.S.X.
0.023.20.901606536_atCB971452hypothetical protein LOC100249578-1e+0At2g43720unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.796.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.796.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.395.2GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.094.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.993.8GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.993.8GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.390.7GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.390.7GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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