Co-expression analysis

Gene ID	1619208_at
Gene name	hypothetical protein LOC100248930
Homology with Arabidopsis	Similar to At5g48950: thioesterase family protein (HF=6e+0)
Module size	8 genes
NF	0.61
%ile	87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.85	1619208_at	CA814525	hypothetical protein LOC100248930	-	6e+0	At5g48950	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.93	1613603_at	CF211665	hypothetical protein LOC100248706	-	1e-7	At1g47670	amino acid transporter family protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.91	1617596_at	CF201215.1	hypothetical protein LOC100264999	-	1e+0	At4g32590	ferredoxin-related	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.89	1613837_at	CF605759	hypothetical protein LOC100248706	-	4e-4	At1g47670	amino acid transporter family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.93	1610600_at	CA813949	hypothetical protein LOC100242774 /// hypothetical protein LOC100248732 /// hypothetical protein LOC100253829	-	3e-1	At3g08580	AAC1 (ADP/ATP CARRIER 1)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.92	1617483_at	CD799044	hypothetical protein LOC100267019	-	1e+0	At2g04170	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.89	1609218_at	BM437324	-	-	3e-1	At4g40030	histone H3.2	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.90	1609744_at	CF203760.1	hypothetical protein LOC100240811 /// hypothetical protein LOC100263073	-	2e+0	At3g42630	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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