Co-expression analysis

Gene ID	1619188_at
Gene name
Homology with Arabidopsis	Similar to At1g48940: plastocyanin-like domain-containing protein (HF=2e+0)
Module size	6 genes
NF	0.42
%ile	63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.95	1619188_at	CF204375.1	-	-	2e+0	At1g48940	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.95	1615204_at	CF371804	-	-	1e+0	At3g21580	cobalt ion transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1610470_at	CF202637.1	-	-	1e-7	At5g15150	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.95	1617934_at	BM437104	-	-	1e-76	At2g34590	transketolase family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.95	1607773_at	CD719602	-	-	2e-30	At5g07290	AML4 (ARABIDOPSIS MEI2-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.95	1622228_at	CF568837	-	-	4e-68	At1g52740	HTA9 (HISTONE H2A PROTEIN 9)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.1	99.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.5	98.9	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.1	98.7	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.8	98.6	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.9	97.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.7	97.7	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.6	96.0	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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