Co-expression analysis

Gene ID 1619126_s_at
Gene name hypothetical protein LOC100264493
Homology with ArabidopsisSimilar to At4g23420: short-chain dehydrogenase/reductase (SDR) family protein (HF=1e-20)
Module size 6 genes
NF 0.25
%ile 36.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971619126_s_atCF515258hypothetical protein LOC100264493-1e-20At4g23420short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8093.60.971615139_atCF206723.1hypothetical protein LOC100264493-6e-3At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.3345.70.981619362_atCA817556hypothetical protein LOC100267110-4e+0At5g06650GIS2 (GLABROUS INFLORESCENCE STEMS 2)O.I.H.G.S.X.
0.2734.00.981607938_atCB343740--2e-11At4g39970haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2225.60.971615099_s_atCB970583hypothetical protein LOC100242764 /// similar to cytochrome f-0Atcg00540-O.I.H.G.S.X.
0.099.40.971608562_atCB349150hypothetical protein LOC100241976-1e-147At5g66190FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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