Co-expression analysis

Gene ID	1619034_at
Gene name	hypothetical protein LOC100264301
Homology with Arabidopsis	Similar to At4g15393: CYP702A5 (HF=1e-3)
Module size	6 genes
NF	0.52
%ile	77.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.72	1619034_at	CK136955.1	hypothetical protein LOC100264301	-	1e-3	At4g15393	CYP702A5	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.93	1607288_at	CK136901.1	-	-	8e+0	At4g30180	transcription factor/ transcription regulator	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.93	1611682_at	CB036119	-	-	3e-2	At1g69040	ACR4 (ACT REPEAT 4)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.94	1609875_at	AY156047.1	protease inhibitor /// similar to protease inhibitor	-	3e+0	At5g41420	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1611666_s_at	AY156047.1	protease inhibitor	-	3e+0	At5g41420	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.78	1615801_at	CK138174.1	-	-	4e-1	At1g65060	4CL3	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.3	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.3	97.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.9	96.6	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.8	96.4	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.3	95.2	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.1	89.1	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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