Co-expression analysis

Gene ID	1619028_at
Gene name	hypothetical protein LOC100248919
Homology with Arabidopsis	Similar to At3g60620: phosphatidate cytidylyltransferase family protein (HF=3e-26)
Module size	6 genes
NF	0.62
%ile	89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1619028_at	CF205704.1	hypothetical protein LOC100248919	-	3e-26	At3g60620	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.98	1613951_at	CF404624	hypothetical protein LOC100242676	-	1e-13	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1607166_at	CF517014	hypothetical protein LOC100254901	-	2e+1	Atmg00730	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1608770_at	CF211789	-	-	6e-21	At3g60620	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1614839_s_at	CB978167	hypothetical protein LOC100251023	-	3e-10	At1g04290	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.99	1608447_at	CB913704	hypothetical protein LOC100244219	-	3e-1	At3g44620	protein tyrosine phosphatase	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.9	93.8	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.9	93.8	GSM436405	V. riparia (VR, PI588259) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.2	89.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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