Co-expression analysis

Gene ID	1618945_at
Gene name	hypothetical protein LOC100253697
Homology with Arabidopsis	Similar to At4g35260: IDH1 (ISOCITRATE DEHYDROGENASE 1) (HF=1e-25)
Module size	7 genes
NF	0.56
%ile	83.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1618945_at	CF214077	hypothetical protein LOC100253697	-	1e-25	At4g35260	IDH1 (ISOCITRATE DEHYDROGENASE 1)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.99	1622387_s_at	CF514535	hypothetical protein LOC100245490	-	1e-28	At5g47570	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1615356_at	CF403414	hypothetical protein LOC100267033	-	3e-5	At3g53310	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.98	1617530_s_at	CA812136	hypothetical protein LOC100258272	-	3e-4	At3g12260	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1608505_s_at	BQ793910	hypothetical protein LOC100241945	-	4e-4	At3g08610	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1606789_at	CF415022	similar to vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)	-	7e-83	At4g34720	AVA-P1	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.99	1612412_at	CB005149	hypothetical protein LOC100259477	-	5e-104	At3g02090	mitochondrial processing peptidase beta subunit, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436353	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436374	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.3	90.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.2	89.9	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.1	89.1	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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