Co-expression analysis

Gene ID 1618919_at
Gene name hypothetical protein LOC100244316
Homology with ArabidopsisSimilar to At5g05113: unknown protein (HF=4e+0)
Module size 7 genes
NF 0.49
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.961618919_atBQ797810hypothetical protein LOC100244316-4e+0At5g05113unknown proteinO.I.H.G.S.X.
0.6183.20.971613156_atCF209286hypothetical protein LOC100247989-6e-5At1g53400unknown proteinO.I.H.G.S.X.
0.5980.60.951608054_atCB350151--7e+0At5g04853unknown proteinO.I.H.G.S.X.
0.5577.30.981618446_atCB969242hypothetical protein LOC100253086-1e-85At5g63890ATHDH (HISTIDINOL DEHYDROGENASE)O.I.H.G.S.X.
0.3345.70.981621721_atCD718881hypothetical protein LOC100248049-3e-17At5g08320unknown proteinO.I.H.G.S.X.
0.2937.70.971619373_atCB920390hypothetical protein LOC100258412-5e-50At5g43940HOT5 (sensitive to hot temperatures 5)O.I.H.G.S.X.
0.1819.40.971607923_atCA816873hypothetical protein LOC100245744-4e-1At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.294.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.194.6GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.893.4GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.591.9GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.491.3GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.289.9GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, HY02G07u_at, orthologous to the query gene, 1618919_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5572.0HY02G07u_atAt5g05113--4e+0At2g28420lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.8694.8Contig8468_atAt5g05113--1e-12At4g33050EDA39 (embryo sac development arrest 39)O.I.H.G.S.X.
0.7891.2HR01A09u_atAt5g05113--2e+0At5g55000FIP2O.I.H.G.S.X.
0.7891.2Contig11154_atAt5g05113--1e-15At5g66210CPK28O.I.H.G.S.X.
0.6784.7Contig6325_atAt5g05113--4e-1At5g25490zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.6380.3Contig12027_atAt5g05113ORG4-2e-3At2g06010ORG4 (OBP3-RESPONSIVE GENE 4)O.I.H.G.S.X.
0.5572.0Contig11957_atAt5g05113--5e-2At3g48280CYP71A25O.I.H.G.S.X.
0.4458.9Contig24268_atAt5g05113--2e+0At5g57345unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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