Co-expression analysis

Gene ID 1618912_at
Gene name hypothetical protein LOC100260079
Homology with ArabidopsisSimilar to At3g18880: ribosomal protein S17 family protein (HF=3e-1)
Module size 8 genes
NF 0.15
%ile 23.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8895.40.941618912_atCF212950hypothetical protein LOC100260079-3e-1At3g18880ribosomal protein S17 family proteinO.I.H.G.S.X.
0.4260.10.931615343_atCB977866hypothetical LOC100242282-2e+0At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.3650.70.981617288_atCD712122similar to ATPAP18/PAP18 (purple acid phosphatase 18); acid phosphatase/ protein serine/threonine phosphatase-7e-19At3g20500PAP18 (PURPLE ACID PHOSPHATASE 18)O.I.H.G.S.X.
0.2530.50.961613123_atCF215236hypothetical protein LOC100248013-7e-2At2g20100ethylene-responsive family proteinO.I.H.G.S.X.
0.1414.40.961613459_atBQ798130hypothetical protein LOC100250844-6e-6At4g29660EMB2752 (EMBRYO DEFECTIVE 2752)O.I.H.G.S.X. protein LOC100255512-1e+0At1g45243DC1 domain-containing proteinO.I.H.G.S.X. protein LOC100253143-1e-56At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X. protein LOC100255224-4e-17At1g74520ATHVA22AO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.289.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.289.9GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.289.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.189.1GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.088.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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