Co-expression analysis

Gene ID 1618907_x_at
Gene name
Homology with ArabidopsisSimilar to At5g17470: calmodulin-related protein, putative (HF=4e+0)
Module size 6 genes
NF 0.77
%ile 97.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971618907_x_atCF202612.1--4e+0At5g17470calmodulin-related protein, putativeO.I.H.G.S.X.
0.8093.60.971615753_atCF207576--2e-11At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.
0.7390.80.981616230_x_atCF202354.1--2e+1At5g43510-O.I.H.G.S.X.
0.7189.50.961614054_atCF206745.1--4e-47At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)O.I.H.G.S.X.
0.5779.80.971609380_x_atCF203033.1--8e-10At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.5072.70.981620380_x_atCF203025.1--1e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436352Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.17434.1.A1_at, orthologous to the query gene, 1618907_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8094.0Zm.17434.1.A1_atAt5g17470--9e-1At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.7188.2Zm.8950.1.A1_atAt5g17470--1e-17At2g18230AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)O.I.H.G.S.X.
0.7188.2Zm.16351.1.A1_atAt5g17470AIG2-like protein-5e-4At2g24390-O.I.H.G.S.X.
0.6582.1Zm.19286.1.S1_atAt5g17470hypothetical protein LOC100275478-7e-1At3g25855unknown proteinO.I.H.G.S.X.
0.6179.5Zm.5480.1.A1_atAt5g17470glycine-rich RNA-binding protein 7-5e-1At2g46000unknown proteinO.I.H.G.S.X.
0.6077.8Zm.6372.1.S1_atAt5g17470--8e+0At4g25830integral membrane family proteinO.I.H.G.S.X.
0.6077.8Zm.13484.1.A1_atAt5g17470--3e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.6077.8Zm.16259.2.A1_x_atAt5g17470hypothetical protein LOC100273269-4e-7At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.5976.1Zm.8758.1.A1_atAt5g17470--6e+0At1g26260CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5)O.I.H.G.S.X.
0.5976.1Zm.7437.1.A1_atAt5g17470--1e+0At3g58100PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5)O.I.H.G.S.X.
0.5875.1Zm.19026.1.A1_atAt5g17470hypothetical protein LOC100193145-2e-5At3g20250APUM5 (Arabidopsis Pumilio 5)O.I.H.G.S.X.
0.5875.1Zm.1012.1.S1_atAt5g17470--3e-3At3g24210ankyrin repeat family proteinO.I.H.G.S.X.
0.5674.4Zm.6063.2.S1_atAt5g17470Vacuolar proton pump homolog1-2e-10At1g15690AVP1O.I.H.G.S.X.
0.5571.6Zm.1019.1.A1_atAt5g17470actin-depolymerizing factor 5-2e-19At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)O.I.H.G.S.X.
0.5571.6Zm.2937.1.A1_atAt5g17470--2e+0At3g13227serine-rich protein-relatedO.I.H.G.S.X.
0.5469.8Zm.4027.1.S1_a_atAt5g17470hypothetical protein LOC100194227 /// hypothetical protein LOC100272558 /// endo-1,3;1,4-beta-D-glucanase-3e+0At2g02030F-box family proteinO.I.H.G.S.X.
0.5469.8Zm.5458.1.A1_atAt5g17470starch synthase IIc precursor-2e+0At3g01940unknown proteinO.I.H.G.S.X.
0.5469.8Zm.1405.1.S1_atAt5g17470--3e+0At4g32080unknown proteinO.I.H.G.S.X.
0.5469.8Zm.11384.1.A1_atAt5g17470--7e-21At3g21650serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeO.I.H.G.S.X.
0.5166.4Zm.4615.2.A1_atAt5g17470--2e-1At1g58420-O.I.H.G.S.X.
0.4961.9Zm.6064.1.S1_atAt5g17470low-molecular-weight cysteine-rich protein LCR70-4e+0At4g04330unknown proteinO.I.H.G.S.X.
0.4861.3Zm.4986.1.S1_a_atAt5g17470hypothetical protein LOC100279549-2e-91At3g29360UDP-glucose 6-dehydrogenase, putativeO.I.H.G.S.X.
0.4861.3Zm.15896.1.A1_atAt5g17470--4e-16At4g32010HSL1 (HSI2-LIKE 1)O.I.H.G.S.X.
0.4861.3Zm.9070.1.A1_atAt5g17470drought-induced protein 1-5e-1At2g37970SOUL-1O.I.H.G.S.X.
0.4759.9Zm.5818.1.A1_atAt5g17470--4e-7At4g00570malate oxidoreductase, putativeO.I.H.G.S.X.
0.3131.6Zm.19312.1.A1_atAt5g17470--1e+1At5g54660heat shock protein-relatedO.I.H.G.S.X.
0.2928.1Zm.4582.1.A1_atAt5g17470hypothetical protein LOC100275429-2e+0At4g18430AtRABA1e (Arabidopsis Rab GTPase homolog A1e)O.I.H.G.S.X.
0.2724.6Zm.19311.1.A1_atAt5g17470AT-hook protein 1-3e-1At4g09270unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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