Co-expression analysis

Gene ID 1618892_at
Gene name
Homology with ArabidopsisSimilar to At3g23800: SBP3 (selenium-binding protein 3) (HF=2e-9)
Module size 7 genes
NF 0.46
%ile 68.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.931618892_atCF200898.1--2e-9At3g23800SBP3 (selenium-binding protein 3)O.I.H.G.S.X.
0.7390.80.921608230_atCB978302--4e+0At1g13580LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)O.I.H.G.S.X.
0.5072.70.931616035_atBM436696hypothetical protein LOC100244951-2e-3At4g15540-O.I.H.G.S.X.
0.4057.70.921612379_atCF414853hypothetical protein LOC100265626-2e-1At2g34123-O.I.H.G.S.X.
0.4057.70.941610891_x_atCF201787.1--8e-1At4g34760auxin-responsive family proteinO.I.H.G.S.X.
0.3345.70.941614812_s_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.2632.00.931610957_atCF207187hypothetical protein LOC100241474-4e+0At4g09320NDPK1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.591.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.591.9GSM147672Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation1Link to GEO
2.390.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.289.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.189.1GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO
2.189.1GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO
2.088.2GSM147731Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation60Link to GEO
2.088.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM287892Pink soft berry C11 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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