Co-expression analysis

Gene ID	1618889_at
Gene name
Homology with Arabidopsis	Similar to At4g08230: glycine-rich protein (HF=2e-1)
Module size	7 genes
NF	0.32
%ile	46.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.94	1618889_at	CB981513	-	-	2e-1	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.95	1617712_at	CK138139.1	-	-	4e-4	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.95	1614517_x_at	CK138139.1	-	-	4e-4	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1611086_at	CF415431	hypothetical protein LOC100249245	-	3e-13	At5g23940	EMB3009 (embryo defective 3009)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.95	1616094_at	CF372451	MYBPA1 protein	-	5e-8	At1g18570	MYB51 (MYB DOMAIN PROTEIN 51)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.95	1611378_at	CF606069	hypothetical protein LOC100244478	-	2e-8	At1g60630	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.96	1615295_at	CF373832	hypothetical protein LOC100259092	-	4e-1	At4g08190	Ras-related GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.4	95.5	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.1	94.6	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.6	92.5	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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