Co-expression analysis

Gene ID 1618881_x_at
Gene name
Homology with ArabidopsisSimilar to At5g11120: unknown protein (HF=7e+0)
Module size 24 genes
NF 0.30
%ile 43.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8795.20.931618881_x_atCF202933.1--7e+0At5g11120unknown proteinO.I.H.G.S.X.
0.5375.20.961610543_atCF512081--8e+0At4g35280zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4969.30.941613875_atCA816775--2e-1At3g29638-O.I.H.G.S.X.
0.4464.10.951617335_atCF207178--4e-1At2g18410unknown proteinO.I.H.G.S.X.
0.4260.10.961613609_atCF211763--1e+0At1g11230unknown proteinO.I.H.G.S.X.
0.3853.60.951610461_atCF514657--2e-1At1g03030phosphoribulokinase/uridine kinase family proteinO.I.H.G.S.X.
0.3751.70.941613218_atCF202458.1--3e+0At1g80520-O.I.H.G.S.X.
0.3548.50.951607820_atCB975566--6e+0At3g47836unknown proteinO.I.H.G.S.X.
0.3446.80.941622124_atCF514734--2e+0At2g22570NIC1 (NICOTINAMIDASE 1)O.I.H.G.S.X.
0.3446.80.941611130_atCB345470--3e+0At5g55330membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedO.I.H.G.S.X.
0.3446.80.951619805_atCB976900similar to leucine-rich repeat protein-related-4e-9At1g25570leucine-rich repeat protein-relatedO.I.H.G.S.X.
0.3243.10.961609085_atCF207769--9e-1At5g02790In2-1 protein, putativeO.I.H.G.S.X.
0.3243.10.961616040_atCF513277--6e+0At1g57850Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.3243.10.941608754_atCB980267--3e-1At4g01430nodulin MtN21 family proteinO.I.H.G.S.X.
0.3243.10.941615721_atCA818745--4e+0At3g23620brix domain-containing proteinO.I.H.G.S.X.
0.3141.30.961619332_atCF202464.1hypothetical protein LOC100257476-1e+0Atmg00450-O.I.H.G.S.X.
0.3039.40.941607573_atCB349079--4e+0At4g10190-O.I.H.G.S.X.
0.2937.70.951621367_atCF210106--1e+0At2g29440ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)O.I.H.G.S.X.
0.2530.50.961621019_atCF201902.1--1e+0At5g65360histone H3O.I.H.G.S.X.
0.2327.50.951609114_atCF201212.1--3e+0At5g39581unknown proteinO.I.H.G.S.X.
0.1920.90.961611884_atCF569214.1--1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.1920.90.961621749_x_atCF569214.1--1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.1819.40.941618745_atCF202835.1--7e-4At1g55680WD-40 repeat family proteinO.I.H.G.S.X.
0.1010.30.951619679_atCB977224--1e+0At3g15690biotin carboxyl carrier protein of acetyl-CoA carboxylase-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.297.1GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.784.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.784.7GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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