Co-expression analysis

Gene ID	1618802_s_at
Gene name	hypothetical protein LOC100264326
Homology with Arabidopsis	Similar to At1g34780: ATAPRL4 (APR-like 4) (HF=9e-4)
Module size	15 genes
NF	0.27
%ile	38.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	95.4	0.98	1618802_s_at	CF205022.1	hypothetical protein LOC100264326	-	9e-4	At1g34780	ATAPRL4 (APR-like 4)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.99	1613769_at	CB970019	hypothetical protein LOC100265267	-	4e-48	At1g51690	ATB ALPHA	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.98	1614216_at	CF512284	hypothetical protein LOC100260586	-	2e-72	At1g53500	MUM4 (MUCILAGE-MODIFIED 4)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.98	1619154_at	CF212140	hypothetical protein LOC100246237	-	1e-7	At4g25770	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.98	1621252_at	CB978314	hypothetical protein LOC100263936	-	2e-8	At3g08620	KH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1622033_at	CB917346	hypothetical protein LOC100251869	-	1e-25	At3g11130	clathrin heavy chain, putative	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.99	1617845_at	CD800649	hypothetical protein LOC100263968	-	4e-35	At2g38630	-	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.99	1614110_s_at	CD801616	cullin 1	-	2e-19	At4g02570	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.99	1617476_at	CB345793	hypothetical protein LOC100246888	-	8e-12	At2g42230	tubulin-specific chaperone C-related	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1620980_s_at	CF209157	hypothetical protein LOC100255909	-	7e-6	At1g14685	BPC2 (BASIC PENTACYSTEINE 2)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.98	1609716_at	CA810704	hypothetical protein LOC100265922	-	3e-1	At2g21210	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.99	1613582_at	CF204478.1	hypothetical protein LOC100261825	-	6e-12	At5g14170	CHC1	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.98	1619715_at	CF207152	hypothetical protein LOC100243011	-	5e-39	At1g30470	SIT4 phosphatase-associated family protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.98	1607444_at	BQ798524	hypothetical protein LOC100247182	-	1e+0	At4g20095	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.99	1610421_at	CF212555	hypothetical protein LOC100258884	-	4e-48	At5g54680	ILR3 (iaa-leucine resistant3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.8	86.0	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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