Co-expression analysis

Gene ID 1618792_at
Gene name
Homology with ArabidopsisSimilar to At1g61250: SC3 (SECRETORY CARRIER 3) (HF=1e-37)
Module size 15 genes
NF 0.53
%ile 79.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.981618792_atCB348194--1e-37At1g61250SC3 (SECRETORY CARRIER 3)O.I.H.G.S.X.
0.7390.80.991618690_atCF207597hypothetical protein LOC100259195-3e-16At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.
0.7289.70.991613706_atCA808981hypothetical protein LOC100258971-2e-15At4g38930ubiquitin fusion degradation UFD1 family proteinO.I.H.G.S.X.
0.6787.90.991617903_atCF207014.1hypothetical protein LOC100266203-7e+0At5g54850unknown proteinO.I.H.G.S.X.
0.6787.90.991614009_atBQ797920hypothetical protein LOC100242045-4e-19At1g14000VIK (VH1-INTERACTING KINASE)O.I.H.G.S.X.
0.5679.40.991607761_atCB974335hypothetical protein LOC100247652-9e-5At1g56460PAPA-1-like family protein / zinc finger (HIT type) family proteinO.I.H.G.S.X.
0.5475.70.991618130_atCF511795hypothetical protein LOC100261654-1e+0At5g23040CDF1 (CELL GROWTH DEFECT FACTOR 1)O.I.H.G.S.X.
0.5072.70.991619759_atCA814682hypothetical protein LOC100253701-5e-29At2g41530SFGH (S-FORMYLGLUTATHIONE HYDROLASE)O.I.H.G.S.X.
0.4969.30.991611412_atCF517248hypothetical protein LOC100244694-2e+0At5g37480unknown proteinO.I.H.G.S.X.
0.4767.70.991622518_atCF514125hypothetical protein LOC100255499-1e+0At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.
0.4464.10.981620790_atCF515444hypothetical protein LOC100249710-5e-4At5g43960nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4464.10.991606368_s_atCF208516actin 1-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.4158.70.99AFFX-Vvi-actin-3_s_atactin 1--O.I.H.G.S.X.
0.4057.70.991612360_atCB970071hypothetical protein LOC100244110-2e-152At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.3954.90.991617385_atCF513590hypothetical protein LOC100251722-2e-87At2g27020PAG1O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO
2.591.9GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.491.3GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO
2.390.7GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
2.289.9GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.886.0GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
1.886.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.784.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.683.3GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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