Co-expression analysis

Gene ID 1618738_at
Gene name hypothetical protein LOC100252524
Homology with ArabidopsisSimilar to At1g30230: elongation factor 1-beta / EF-1-beta (HF=3e-45)
Module size 14 genes
NF 0.53
%ile 78.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.981618738_atCF372596hypothetical protein LOC100252524-3e-45At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.
0.6787.90.981621535_s_atBQ792471hypothetical protein LOC100247214-6e-87At2g18020EMB2296 (embryo defective 2296)O.I.H.G.S.X.
0.6585.00.981620069_s_atCB969496hypothetical protein LOC100248991-9e-51At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.
0.6183.20.981616740_s_atBQ792710similar to ADP-ribosylation factor-3e-110At5g14670ATARFA1B (ADP-ribosylation factor A1B)O.I.H.G.S.X.
0.5679.40.981622597_atCF212895hypothetical protein LOC100244242-1e-4At3g43520unknown proteinO.I.H.G.S.X.
0.5475.70.981616446_atCB978171hypothetical protein LOC100265064-3e-67At2g29140APUM3 (Arabidopsis Pumilio 3)O.I.H.G.S.X.
0.5375.20.981608914_atCB975880hypothetical protein LOC100259978-1e-50At3g13772endomembrane protein 70, putativeO.I.H.G.S.X.
0.5072.70.991616420_atCF515326hypothetical protein LOC100244821-0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.4969.30.981610560_atBQ797613hypothetical protein LOC100258347-7e-52At3g4737040S ribosomal protein S20 (RPS20B)O.I.H.G.S.X.
0.4868.80.991613058_a_atCF511255hypothetical protein LOC100250363-9e-9At4g27000ATRBP45CO.I.H.G.S.X.
0.4767.70.981611713_s_atCB347325hypothetical protein LOC100265590-4e-10At1g1593040S ribosomal protein S12 (RPS12A)O.I.H.G.S.X.
0.4361.50.981608677_atCB977949hypothetical protein LOC100258930-3e-22At3g19130ATRBP47B (RNA-binding protein 47B)O.I.H.G.S.X.
0.4158.70.981619109_s_atCF203829.1hypothetical protein LOC100259405-1e+1At5g25020unknown proteinO.I.H.G.S.X.
0.3345.70.991613860_s_atCF512506cyc07-6e-38At3g0484040S ribosomal protein S3A (RPS3aA)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.697.6GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.595.7GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.893.4GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.390.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.189.1GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.189.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.088.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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