Co-expression analysis

Gene ID	1618614_at
Gene name	hypothetical protein LOC100260667
Homology with Arabidopsis	Similar to At5g62100: ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2) (HF=2e-5)
Module size	8 genes
NF	0.34
%ile	50.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	88.6	0.95	1618614_at	CF404904	hypothetical protein LOC100260667	-	2e-5	At5g62100	ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1607812_at	BQ799035	hypothetical protein LOC100252911	-	1e-1	At4g34800	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.96	1622845_at	CF214275	hypothetical protein LOC100243208	-	2e-18	At1g52150	ATHB-15	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.96	1612206_at	CD800449	hypothetical protein LOC100252884	-	9e-1	At2g20660	RALFL14 (ralf-like 14)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1609258_at	CD012392	hypothetical protein LOC100249520	-	7e-2	At2g42490	copper amine oxidase, putative	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1614200_at	CD009831	hypothetical protein LOC100258356	-	1e-3	At1g48220	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.96	1606646_at	CA812296	hypothetical protein LOC100264115	-	2e-23	At5g09870	CESA5 (CELLULOSE SYNTHASE 5)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1607816_at	CF216068	hypothetical protein LOC100248686	-	1e-28	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	99.4	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
7.3	99.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.1	96.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.2	94.9	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.3	90.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.1	89.1	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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