Co-expression analysis

Gene ID	1618457_at
Gene name
Homology with Arabidopsis	Similar to At1g07250: UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4) (HF=1e-4)
Module size	6 genes
NF	0.04
%ile	8.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	79.4	0.85	1618457_at	CF205125.1	-	-	1e-4	At1g07250	UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4)	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.88	1611437_at	CD800413	hypothetical protein LOC100262739	-	1e+0	At1g59600	ZCW7	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.86	1613289_at	CB970179	hypothetical protein LOC100257579	-	4e-7	At1g08510	FATB (fatty acyl-ACP thioesterases B)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.85	1610671_at	CB970176	-	-	4e+0	At5g38270	F-box family protein	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.85	1617609_at	CF207468	hypothetical protein LOC100255514	-	3e-24	At5g24380	YSL2 (YELLOW STRIPE LIKE 2)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.86	1622563_at	CF514103	hypothetical protein LOC100248493	-	1e-15	At3g12800	SDRB (SHORT-CHAIN DEHYDROGENASE-REDUCTASE B)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.2	94.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.7	93.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.6	92.5	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147688	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	17

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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