Co-expression analysis

Gene ID	1618440_s_at
Gene name	hypothetical protein LOC100256565
Homology with Arabidopsis	Similar to At5g15600: SP1L4 (SPIRAL1-LIKE4) (HF=2e-2)
Module size	6 genes
NF	0.22
%ile	31.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.96	1618440_s_at	CD801284	hypothetical protein LOC100256565	-	2e-2	At5g15600	SP1L4 (SPIRAL1-LIKE4)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1613917_s_at	CF403338	hypothetical protein LOC100248555	-	1e-1	At3g05300	cytidine/deoxycytidylate deaminase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1622269_at	CA814576	hypothetical protein LOC100262316	-	1e+0	At5g64010	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1608238_at	BQ800567	hypothetical protein LOC100247004	-	1e+0	At1g56660	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.95	1615646_at	CB974276	hypothetical protein LOC100260142	-	4e+0	At4g12617	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.96	1609007_at	CB003639	hypothetical protein LOC100240979	-	5e-27	At4g30210	ATR2 (ARABIDOPSIS P450 REDUCTASE 2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.3	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
3.4	95.5	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.2	94.9	GSM147702	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	31
3.0	94.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.0	94.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.6	92.5	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM147690	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	19
2.5	91.9	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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