Co-expression analysis

Gene ID 1618432_at
Gene name hypothetical protein LOC100267315
Homology with ArabidopsisSimilar to At5g13825: unknown protein (HF=6e+0)
Module size 6 genes
NF 0.62
%ile 89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951618432_atCB345244hypothetical protein LOC100267315-6e+0At5g13825unknown proteinO.I.H.G.S.X.
0.6787.90.971620398_atCA810891hypothetical LOC100263767-1e-3At3g09690hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5577.30.961609508_atCB976923hypothetical protein LOC100242787-4e-3At5g45960GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5072.70.951622682_atCB001944hypothetical protein LOC100256501-2e-67At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.H.G.S.X.
0.4666.50.961618107_atCF403374hypothetical protein LOC100263831-1e-7At4g25650ACD1-LIKE (ACD1-LIKE)O.I.H.G.S.X.
0.4057.70.971621016_atCA817314similar to transporter-related-3e-10At5g20380PHT4O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8394.60.931609020_atCB343738hypothetical protein LOC100256086-5e+0At3g18460unknown proteinO.I.H.G.S.X.
0.6384.30.931608465_atCF200917.1hypothetical protein LOC100247572-5e+0At5g39260ATEXPA21 (ARABIDOPSIS THALIANA EXPANSIN A21)O.I.H.G.S.X.
0.6081.90.941610735_atCB341620hypothetical protein LOC100258753-2e-3At1g18660zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6081.90.951612382_atCB978155--2e-1At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.5375.20.921621418_atCB340794--2e-3At3g21800UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8)O.I.H.G.S.X.
0.5375.20.931622503_atCF203022.1--9e-8At4g37990ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)O.I.H.G.S.X.
0.5072.70.911614870_atCF516638--8e-1At2g21220auxin-responsive protein, putativeO.I.H.G.S.X.
0.5072.70.941611167_atCD007118hypothetical protein LOC100250725-2e-50At5g64840ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5)O.I.H.G.S.X.
0.5072.70.951620634_atCD720882hypothetical protein LOC100247245-7e-18At1g44446CH1 (CHLORINA 1)O.I.H.G.S.X.
0.5072.70.961617386_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.5072.70.961614720_atCD719089hypothetical protein LOC100263831-1e-44At4g25650ACD1-LIKE (ACD1-LIKE)O.I.H.G.S.X.
0.4666.50.941609491_atCA809519similar to peptidase S41 family protein-1e-16At3g57680peptidase S41 family proteinO.I.H.G.S.X.
0.4666.50.951622400_atBQ796203hypothetical protein LOC100262534-1e-3At2g23390-O.I.H.G.S.X.
0.4464.10.861613143_atCF512079--4e+0At5g27889unknown proteinO.I.H.G.S.X.
0.4464.10.881622706_atCB002948--1e+0At3g62030peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)O.I.H.G.S.X.
0.4464.10.911617600_atCF513622hypothetical protein LOC100267978-2e-5At3g26490phototropic-responsive NPH3 family proteinO.I.H.G.S.X.
0.4464.10.951606724_atCF215838hypothetical protein LOC100247480-4e-9At1g25530lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.4158.70.921619380_atCF515301hypothetical protein LOC100264975-2e-5At2g26800hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putativeO.I.H.G.S.X.
0.4057.70.961607658_atCF512465hypothetical protein LOC100259354-2e-31At2g24820TIC55 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55)O.I.H.G.S.X.
0.3345.70.921619299_atCB968789hypothetical protein LOC100252463-4e+0At5g23920unknown proteinO.I.H.G.S.X.
0.3345.70.941619486_atCB001727hypothetical protein LOC100241765-5e+0At5g50790nodulin MtN3 family proteinO.I.H.G.S.X.
0.3345.70.941609053_atBM436398hypothetical protein LOC100259720-2e-6At2g37970SOUL-1O.I.H.G.S.X.
0.3345.70.961619157_atAF359521.1inward rectifying shaker-like K+ channel-3e-66At4g18290KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)O.I.H.G.S.X.
0.3243.10.911609580_atCF213100hypothetical protein LOC100260760-5e-10At2g42750DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3141.30.941620639_atCA817351hypothetical protein LOC100247658-3e-1At1g10455unknown proteinO.I.H.G.S.X.
0.3039.40.921620650_s_atCF207485hypothetical protein LOC100255907-7e-5At4g37990ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)O.I.H.G.S.X.
0.2937.70.851617227_atCD712927--1e-1At3g17350unknown proteinO.I.H.G.S.X.
0.2937.70.911608230_atCB978302--4e+0At1g13580LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)O.I.H.G.S.X.
0.2937.70.911606566_atCF211641hypothetical protein LOC100252008-1e-12At4g38840auxin-responsive protein, putativeO.I.H.G.S.X.
0.2734.00.931608075_atCA814201hypothetical protein LOC100243451-2e-4At4g01935unknown proteinO.I.H.G.S.X.
0.2734.00.941617175_atCB971040hypothetical protein LOC100267980-1e+0Atmg00910-O.I.H.G.S.X.
0.2632.00.851617634_atBM436844--1e+0At4g27360dynein light chain, putativeO.I.H.G.S.X.
0.2632.00.861610137_atCF519071--4e+0At5g40330MYB23 (MYB DOMAIN PROTEIN 23)O.I.H.G.S.X.
0.2530.50.911621020_atCF403719--5e-17At3g56940CRD1 (COPPER RESPONSE DEFECT 1)O.I.H.G.S.X.
0.2530.50.921616410_atCD720592--2e-15At3g21250ATMRP6O.I.H.G.S.X.
0.2530.50.941610042_atCF403823hypothetical protein LOC100261474-4e+0At5g51400unknown proteinO.I.H.G.S.X.
0.2530.50.941610089_atCB343528hypothetical protein LOC100241825-2e-3At1g63120ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)O.I.H.G.S.X.
0.2530.50.941618249_atCF510539hypothetical protein LOC100260378-2e-39At2g24270ALDH11A3O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.893.4GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.793.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
2.692.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.591.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.491.3GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.390.7GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.390.7GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage