Co-expression analysis

Gene ID	1618432_at
Gene name	hypothetical protein LOC100267315
Homology with Arabidopsis	Similar to At5g13825: unknown protein (HF=6e+0)
Module size	6 genes
NF	0.62
%ile	89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.95	1618432_at	CB345244	hypothetical protein LOC100267315	-	6e+0	At5g13825	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1620398_at	CA810891	hypothetical LOC100263767	-	1e-3	At3g09690	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.96	1609508_at	CB976923	hypothetical protein LOC100242787	-	4e-3	At5g45960	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1622682_at	CB001944	hypothetical protein LOC100256501	-	2e-67	At1g16720	HCF173 (high chlorophyll fluorescence phenotype 173)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1618107_at	CF403374	hypothetical protein LOC100263831	-	1e-7	At4g25650	ACD1-LIKE (ACD1-LIKE)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1621016_at	CA817314	similar to transporter-related	-	3e-10	At5g20380	PHT4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.8	93.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.6	92.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.4	91.3	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.3	90.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.3	90.7	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62

Inter-species module comparison

A co-expression module including the barley gene, Contig8411_at, orthologous to the query gene, 1618432_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	78.7	Contig8411_at	At5g13825	-	-	2e-1	At3g58630	transcription factor	O.I.	H.G.	S.X.	Please select
0.80	92.5	Contig19314_at	At5g13825	-	-	2e+0	At5g13780	GCN5-related N-acetyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.75	89.5	Contig19292_at	At5g13825	-	-	1e-33	At2g26300	GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1)	O.I.	H.G.	S.X.	Please select
0.67	84.7	Contig9909_at	At5g13825	-	-	6e-3	At3g11530	vacuolar protein sorting 55 family protein / VPS55 family protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	Contig9908_at	At5g13825	-	-	2e-8	At3g22270	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	75.8	HK04P18r_s_at	At5g13825	CesA6 protein	-	2e+1	Atcg00130	-	O.I.	H.G.	S.X.	Please select
0.53	69.7	HVSMEf0014I15r2_x_at	At5g13825	-	-	2e+0	At5g48000	CYP708A2	O.I.	H.G.	S.X.	Please select
0.32	40.3	Contig3480_at	At5g13825	-	-	4e-1	At5g16660	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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