Co-expression analysis

Gene ID 1618432_at
Gene name hypothetical protein LOC100267315
Homology with ArabidopsisSimilar to At5g13825: unknown protein (HF=6e+0)
Module size 6 genes
NF 0.62
%ile 89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951618432_atCB345244hypothetical protein LOC100267315-6e+0At5g13825unknown proteinO.I.H.G.S.X.
0.6787.90.971620398_atCA810891hypothetical LOC100263767-1e-3At3g09690hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5577.30.961609508_atCB976923hypothetical protein LOC100242787-4e-3At5g45960GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5072.70.951622682_atCB001944hypothetical protein LOC100256501-2e-67At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.H.G.S.X.
0.4666.50.961618107_atCF403374hypothetical protein LOC100263831-1e-7At4g25650ACD1-LIKE (ACD1-LIKE)O.I.H.G.S.X.
0.4057.70.971621016_atCA817314similar to transporter-related-3e-10At5g20380PHT4O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.893.4GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.793.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
2.692.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.591.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.491.3GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.390.7GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.390.7GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig8411_at, orthologous to the query gene, 1618432_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6178.7Contig8411_atAt5g13825--2e-1At3g58630transcription factorO.I.H.G.S.X.
0.8092.5Contig19314_atAt5g13825--2e+0At5g13780GCN5-related N-acetyltransferase, putativeO.I.H.G.S.X.
0.7589.5Contig19292_atAt5g13825--1e-33At2g26300GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1)O.I.H.G.S.X.
0.6784.7Contig9909_atAt5g13825--6e-3At3g11530vacuolar protein sorting 55 family protein / VPS55 family proteinO.I.H.G.S.X.
0.6784.7Contig9908_atAt5g13825--2e-8At3g22270unknown proteinO.I.H.G.S.X.
0.5975.8HK04P18r_s_atAt5g13825CesA6 protein-2e+1Atcg00130-O.I.H.G.S.X.
0.3240.3Contig3480_atAt5g13825--4e-1At5g16660unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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