Co-expression analysis

Gene ID 1618421_at
Gene name hypothetical protein LOC100252493
Homology with ArabidopsisSimilar to At3g57560: aspartate/glutamate/uridylate kinase family protein (HF=6e-6)
Module size 10 genes
NF 0.26
%ile 36.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.961618421_atCF604028hypothetical protein LOC100252493-6e-6At3g57560aspartate/glutamate/uridylate kinase family proteinO.I.H.G.S.X.
0.3853.60.971613987_s_atCA818361hypothetical protein LOC100245893-3e-29At2g16710hesB-like domain-containing proteinO.I.H.G.S.X.
0.3345.70.971617283_atCF372456hypothetical LOC100245758-4e-20At3g49680BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)O.I.H.G.S.X.
0.2937.70.971618794_atCB976136hypothetical protein LOC100240866-1e-13At5g65010ASN2 (ASPARAGINE SYNTHETASE 2)O.I.H.G.S.X.
0.2837.70.971614352_atCD801544hypothetical protein LOC100244495-2e-15At5g42000ORMDL family proteinO.I.H.G.S.X.
0.2734.00.971614540_atCB970409hypothetical protein LOC100249281-1e-13At3g28140calmodulin-binding proteinO.I.H.G.S.X.
0.2632.00.971616489_s_atBQ800343hypothetical protein LOC100267925-7e-12At2g14910unknown proteinO.I.H.G.S.X.
0.2225.60.971616691_atCD715631similar to phosphatidylserine decarboxylase-1e-29At5g57190PSD2 (phosphatidylserine decarboxylase 2)O.I.H.G.S.X.
0.1718.20.971618880_atCF214283hypothetical protein LOC100241859-1e-17At4g27750ISI1 (IMPAIRED SUCROSE INDUCTION 1)O.I.H.G.S.X.
0.1616.70.981615392_s_atCF405619similar to cysteine protease Cp2-9e-10At4g36880CP1 (CYSTEINE PROTEINASE1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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