Co-expression analysis

Gene ID	1618396_at
Gene name	hypothetical protein LOC100261671
Homology with Arabidopsis	Similar to At3g27030: unknown protein (HF=1e-7)
Module size	7 genes
NF	0.19
%ile	28.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	99.0	0.93	1618396_at	CF373590	hypothetical protein LOC100261671	-	1e-7	At3g27030	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1621012_s_at	CB980121	hypothetical protein LOC100263999	-	5e-31	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.95	1609009_at	CF210602	hypothetical protein LOC100267703	-	2e+0	At1g15880	GOS11 (golgi snare 11)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1616489_s_at	BQ800343	hypothetical protein LOC100267925	-	7e-12	At2g14910	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.96	1611681_at	CF513131	hypothetical protein LOC100241604	-	4e+0	At5g39360	EDL2 (EID1-like 2)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1608185_at	CB341695	-	-	6e+0	At3g53990	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.96	1613987_s_at	CA818361	hypothetical protein LOC100245893	-	3e-29	At2g16710	hesB-like domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147677	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	6
2.2	89.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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