Co-expression analysis

Gene ID	1618391_at
Gene name
Homology with Arabidopsis	Similar to At5g12020: HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) (HF=3e-6)
Module size	6 genes
NF	0.01
%ile	1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.88	1618391_at	CD719685	-	-	3e-6	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.90	1612092_at	CD011489	hypothetical protein LOC100264459	-	4e+0	At3g23710	chloroplast inner membrane import protein Tic22, putative	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.94	1619931_s_at	CB349799	hypothetical LOC100246843	-	7e-130	At5g56000	heat shock protein 81-4 (HSP81-4)	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.92	1614594_at	CF518547	-	-	7e-7	At1g79920	ATP binding	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.95	1607502_at	BQ798644	hypothetical protein LOC100265752	-	5e-3	At1g56580	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.94	1615280_at	CB968942	-	-	1e-3	At3g48880	F-box family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.2	89.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7
1.9	87.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.8	86.0	GSM147677	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	6

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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