Co-expression analysis

Gene ID	1618387_at
Gene name	hypothetical protein LOC100249044
Homology with Arabidopsis	Similar to At2g01970: endomembrane protein 70, putative (HF=4e-25)
Module size	6 genes
NF	0.51
%ile	75.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1618387_at	CF215295	hypothetical protein LOC100249044	-	4e-25	At2g01970	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.96	1611760_at	CF604971	hypothetical protein LOC100251409	-	2e+0	At3g14067	subtilase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1616467_at	CF604042	hypothetical protein LOC100259768	-	2e-45	At1g13560	AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1612451_at	CF609753	monodehydroascorbate reductase	-	3e-22	At3g52880	monodehydroascorbate reductase, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1608227_at	CF518942	hypothetical protein LOC100255896	-	1e+0	At5g66930	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1615081_at	CF210891	hypothetical protein LOC100252838	-	2e-17	At3g16090	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.3	98.8	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.6	97.6	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.8	96.4	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.8	96.4	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.1	94.6	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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