Co-expression analysis

Gene ID 1618373_at
Gene name acidic chitinase
Homology with ArabidopsisSimilar to At5g24090: acidic endochitinase (CHIB1) (HF=2e-13)
Module size 6 genes
NF 0.69
%ile 93.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7390.80.861618373_atZ68123.1acidic chitinase-2e-13At5g24090acidic endochitinase (CHIB1)O.I.H.G.S.X.
0.9198.80.881622291_atCF518951hypothetical protein LOC100266558-2e-1At2g31670-O.I.H.G.S.X.
0.6787.90.861607408_atCF216013--2e-1At1g10720BSD domain-containing proteinO.I.H.G.S.X.
0.6787.90.881608262_atAF053341.1class I extracellular chitinase-2e+0At3g04180germin-like protein, putativeO.I.H.G.S.X.
0.4361.50.871609131_atCF514932hypothetical protein LOC100250973-4e-7At1g21245wall-associated kinase-relatedO.I.H.G.S.X.
0.4057.70.891609263_atCB007990--2e+0At4g32690GLB3O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM147701Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation30Link to GEO
3.495.5GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM147707Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation36Link to GEO
2.793.0GSM147700Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation29Link to GEO
2.793.0GSM147682Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation11Link to GEO
2.289.9GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436395V. riparia (VR, PI588259) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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