Co-expression analysis

Gene ID 1618348_at
Gene name hypothetical protein LOC100265921
Homology with ArabidopsisSimilar to At5g45750: AtRABA1c (Arabidopsis Rab GTPase homolog A1c) (HF=1e-47)
Module size 7 genes
NF 0.48
%ile 72.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.981618348_atCF373264hypothetical protein LOC100265921-1e-47At5g45750AtRABA1c (Arabidopsis Rab GTPase homolog A1c)O.I.H.G.S.X.
0.6183.20.991618813_atCB970187hypothetical protein LOC100263840-2e+0At1g69828-O.I.H.G.S.X.
0.5679.40.991614602_atCB004149hypothetical protein LOC100244335-1e-32At2g47900AtTLP3 (TUBBY LIKE PROTEIN 3)O.I.H.G.S.X.
0.4666.50.991610526_atCF212320hypothetical protein LOC100243575-2e-1At2g44580protein binding / zinc ion bindingO.I.H.G.S.X.
0.4361.50.991607444_atBQ798524hypothetical protein LOC100247182-1e+0At4g20095unknown proteinO.I.H.G.S.X.
0.4260.10.991613769_atCB970019hypothetical protein LOC100265267-4e-48At1g51690ATB ALPHAO.I.H.G.S.X.
0.3141.30.991611870_atCF414975hypothetical protein LOC100247177-8e-152At5g09740HAM2 (histone acetyltransferase of the MYST family 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.595.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.395.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.395.2GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
3.294.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.194.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.094.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.793.0GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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