Co-expression analysis

Gene ID 1618243_at
Gene name hypothetical protein LOC100251610
Homology with ArabidopsisSimilar to At5g60790: ATGCN1 (HF=4e-102)
Module size 6 genes
NF 0.49
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.981618243_atCF604301hypothetical protein LOC100251610-4e-102At5g60790ATGCN1O.I.H.G.S.X.
0.7189.50.981621196_atCD798248hypothetical protein LOC100250526-3e-10At2g45260unknown proteinO.I.H.G.S.X.
0.6081.90.981610798_atCD713741--1e+0At5g5842040S ribosomal protein S4 (RPS4D)O.I.H.G.S.X.
0.4666.50.981613027_atCB982624hypothetical protein LOC100264294-5e+0At2g36360kelch repeat-containing proteinO.I.H.G.S.X.
0.4057.70.981616446_atCB978171hypothetical protein LOC100265064-3e-67At2g29140APUM3 (Arabidopsis Pumilio 3)O.I.H.G.S.X.
0.2837.70.981619109_s_atCF203829.1hypothetical protein LOC100259405-1e+1At5g25020unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.499.7GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
8.099.3GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.999.1GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.797.7GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.595.7GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.194.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.993.8GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.692.5GSM147677Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation6Link to GEO
2.591.9GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO
2.491.3GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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