Co-expression analysis

Gene ID 1618236_at
Gene name hypothetical protein LOC100260911
Homology with ArabidopsisSimilar to At1g50350: - (HF=4e-3)
Module size 11 genes
NF 0.52
%ile 77.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8494.80.971618236_atCF210257hypothetical protein LOC100260911-4e-3At1g50350-O.I.H.G.S.X.
0.6183.20.971622567_atCF516028hypothetical protein LOC100266603-2e-20At5g27490integral membrane Yip1 family proteinO.I.H.G.S.X.
0.5577.30.981606778_atCF607072hypothetical protein LOC100261953-6e-30At3g56740ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.5475.70.971613321_atCF516415hypothetical protein LOC100244395-5e-49At5g550702-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.5375.20.971619239_atCF605787hypothetical protein LOC100267514-2e-1At1g48940plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.5273.90.971608708_atCF211873hypothetical protein LOC100255983-2e-9At4g29680type I phosphodiesterase/nucleotide pyrophosphatase family proteinO.I.H.G.S.X.
0.5072.70.971610578_atBG273711hypothetical protein LOC100247027-1e-13At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)O.I.H.G.S.X.
0.5072.70.971608277_atCA816391hypothetical protein LOC100249980-3e-75At4g12230esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.4260.10.981613190_atCF604163hypothetical protein LOC100244118-2e-2At1g16560Per1-like family proteinO.I.H.G.S.X.
0.4057.70.971611102_atCF603491hypothetical protein LOC100259129-4e-22At3g58730vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)O.I.H.G.S.X.
0.3548.50.971618937_atCB920899hypothetical protein LOC100255532-2e-14At4g29960unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.987.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.886.0GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
1.886.0GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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