Co-expression analysis

Gene ID	1618133_at
Gene name	hypothetical protein LOC100259114
Homology with Arabidopsis	Similar to At5g28610: - (HF=2e-1)
Module size	6 genes
NF	0.59
%ile	86.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1618133_at	CF404967	hypothetical protein LOC100259114	-	2e-1	At5g28610	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1608904_at	CK138119.1	similar to F2D10.18	-	6e-9	At1g20696	HMGB3 (HIGH MOBILITY GROUP B 3)	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	1612905_s_at	CB345326	hypothetical protein LOC100258381	-	5e-3	At1g12830	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1609633_s_at	CB971333	hypothetical protein LOC100254082	-	3e-1	At4g15735	SCRL10 (SCR-Like 10)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1607743_at	CF513620	hypothetical protein LOC100252303	-	5e-12	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1615027_s_at	CB977478	hypothetical protein LOC100246785	-	1e-15	At2g32080	PUR ALPHA-1	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.4	99.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.5	95.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
3.4	95.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.9	93.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.8	93.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM436375	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436374	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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