Co-expression analysis

Gene ID 1618133_at
Gene name hypothetical protein LOC100259114
Homology with ArabidopsisSimilar to At5g28610: - (HF=2e-1)
Module size 6 genes
NF 0.59
%ile 86.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.981618133_atCF404967hypothetical protein LOC100259114-2e-1At5g28610-O.I.H.G.S.X.
0.6787.90.981608904_atCK138119.1similar to F2D10.18-6e-9At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)O.I.H.G.S.X.
0.5980.60.981612905_s_atCB345326hypothetical protein LOC100258381-5e-3At1g12830unknown proteinO.I.H.G.S.X.
0.5375.20.981609633_s_atCB971333hypothetical protein LOC100254082-3e-1At4g15735SCRL10 (SCR-Like 10)O.I.H.G.S.X.
0.5072.70.991607743_atCF513620hypothetical protein LOC100252303-5e-12At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.3548.50.981615027_s_atCB977478hypothetical protein LOC100246785-1e-15At2g32080PUR ALPHA-1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.499.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
3.595.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.495.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.993.8GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.893.4GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.893.4GSM436375Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436374Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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