Co-expression analysis

Gene ID 1618131_at
Gene name hypothetical protein LOC100260277
Homology with ArabidopsisSimilar to At2g45860: unknown protein (HF=3e-4)
Module size 18 genes
NF 0.45
%ile 67.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7289.70.981618131_atBQ794066hypothetical protein LOC100260277-3e-4At2g45860unknown proteinO.I.H.G.S.X.
0.5879.80.981607214_atCB347082hypothetical protein LOC100247783-2e-42At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)O.I.H.G.S.X.
0.5679.40.981612599_atCB346782hypothetical protein LOC100265811-3e-4At2g25720unknown proteinO.I.H.G.S.X.
0.5375.20.981611813_s_atBQ794797hypothetical protein LOC100260422-1e-6At5g60460sec61beta family proteinO.I.H.G.S.X.
0.5273.90.981611545_atCB972050hypothetical protein LOC100260759-2e-14At1g76200unknown proteinO.I.H.G.S.X.
0.4767.70.981621679_atCB003331similar to Os11g0657300-4e-22At2g14285-O.I.H.G.S.X.
0.4464.10.981613705_atCF517167hypothetical protein LOC100264130-4e-27At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)O.I.H.G.S.X.
0.4158.70.991612461_atCB969270hypothetical protein LOC100257379-1e-1At3g10220tubulin folding cofactor BO.I.H.G.S.X.
0.4057.70.981615693_atBQ793891--3e+0At3g59760OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C)O.I.H.G.S.X.
0.4057.70.981620599_atCF414825hypothetical protein LOC100246051 /// hypothetical protein LOC100256250-5e+0At5g2029040S ribosomal protein S8 (RPS8A)O.I.H.G.S.X.
0.3954.90.981620447_s_atCB345267hypothetical protein LOC100244156-7e+0At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.
0.3954.90.981614671_atCF210781hypothetical protein LOC100241316-4e-8At3g51500unknown proteinO.I.H.G.S.X.
0.3853.60.991608813_s_atBQ795140hypothetical protein LOC100255523-5e-84At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.3751.70.991606718_atCA817648hypothetical protein LOC100254624-2e-93At5g17060ATARFB1BO.I.H.G.S.X.
0.3345.70.981613068_atBQ793388hypothetical protein LOC100266457-1e+0At1g22590MADS-box family proteinO.I.H.G.S.X.
0.3345.70.981613308_atBQ795900hypothetical protein LOC100247694-8e-14At5g18580FASS (FASS 1)O.I.H.G.S.X.
0.3345.70.991615080_atCB921263hypothetical protein LOC100267377-7e-3At3g52660RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3345.70.991614112_atBQ797230hypothetical protein LOC100252349-3e-11At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.987.2GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.784.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.784.7GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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