Co-expression analysis

Gene ID	1618128_at
Gene name	hypothetical protein LOC100267242
Homology with Arabidopsis	Similar to At2g28310: unknown protein (HF=2e-112)
Module size	6 genes
NF	0.33
%ile	48.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.97	1618128_at	CB009517	hypothetical protein LOC100267242	-	2e-112	At2g28310	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1606832_at	CF214798	hypothetical protein LOC100266088	-	1e-20	At2g20680	glycosyl hydrolase family 5 protein / cellulase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1611072_at	CF371842	hypothetical protein LOC100265691	-	1e-4	At2g35120	glycine cleavage system H protein, mitochondrial, putative	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1615720_s_at	CA817994	hypothetical protein LOC100260806	-	2e-13	At5g06370	NC domain-containing protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.98	1607551_at	CF214610	hypothetical protein LOC100255512	-	1e+0	At1g45243	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1615639_a_at	BQ795365	hypothetical protein LOC100266227	-	2e-14	At2g44060	late embryogenesis abundant family protein / LEA family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	99.1	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.5	98.9	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.5	97.5	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.2	97.1	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.1	94.6	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.1	94.6	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.8	93.4	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.7	93.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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