Co-expression analysis

Gene ID 1618107_at
Gene name hypothetical protein LOC100263831
Homology with ArabidopsisSimilar to At4g25650: ACD1-LIKE (ACD1-LIKE) (HF=1e-7)
Module size 7 genes
NF 0.39
%ile 58.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.961618107_atCF403374hypothetical protein LOC100263831-1e-7At4g25650ACD1-LIKE (ACD1-LIKE)O.I.H.G.S.X.
0.4666.50.961622236_atCB971900hypothetical protein LOC100268024-2e-14At3g01060unknown proteinO.I.H.G.S.X.
0.4464.10.971613486_atCF215097hypothetical protein LOC100253576-1e-20At1g70000DNA-binding family proteinO.I.H.G.S.X.
0.3650.70.961622682_atCB001944hypothetical protein LOC100256501-2e-67At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.H.G.S.X.
0.3548.50.961606996_s_atCA817527hypothetical protein LOC100254512-1e-4At2g05620PGR5 (proton gradient regulation 5)O.I.H.G.S.X.
0.2937.70.961613826_atCA817987hypothetical protein LOC100241562-4e-30At1g55480binding / protein bindingO.I.H.G.S.X.
0.2632.00.961614596_atCD007432hypothetical protein LOC100244123-6e-5At3g18500-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.491.3GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.189.1GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.189.1GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.987.2GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.886.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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