Co-expression analysis

Gene ID	1617917_at
Gene name
Homology with Arabidopsis	Similar to At1g53100: acetylglucosaminyltransferase (HF=4e+0)
Module size	6 genes
NF	0.15
%ile	23.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.1	0.94	1617917_at	CF405637	-	-	4e+0	At1g53100	acetylglucosaminyltransferase	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.94	1608135_at	CF206119.1	-	-	1e+0	At2g47650	UXS4 (UDP-XYLOSE SYNTHASE 4)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.93	1614538_at	AY427198.1	-	-	2e-1	At3g46760	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.94	1618712_at	CB003306	-	-	3e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.94	1615204_at	CF371804	-	-	1e+0	At3g21580	cobalt ion transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.93	1609630_at	CB002524	-	-	4e-14	At3g14205	phosphoinositide phosphatase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.7	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2	94.9	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.82263.1.S1_s_at, orthologous to the query gene, 1617917_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	GmaAffx.82263.1.S1_s_at	At1g53100	-	-	9e-1	At5g63600	FLS5 (FLAVONOL SYNTHASE 5)	O.I.	H.G.	S.X.	Please select
0.67	86.1	Gma.17327.1.S1_at	At1g53100	-	-	2e-1	At5g65480	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	Gma.3009.1.S1_at	At1g53100	metallothionein-II protein	-	4e+0	At5g24200	triacylglycerol lipase	O.I.	H.G.	S.X.	Please select
0.63	82.9	Gma.953.1.S1_at	At1g53100	-	-	6e+0	At5g40700	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	Gma.8432.1.S1_at	At1g53100	precursor (AA -24 to 403)	-	3e+0	At4g28990	RNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.42	59.3	GmaAffx.84879.1.S1_at	At1g53100	-	-	6e-15	At1g17810	BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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