Co-expression analysis

Gene ID	1617845_at
Gene name	hypothetical protein LOC100263968
Homology with Arabidopsis	Similar to At2g38630: - (HF=4e-35)
Module size	8 genes
NF	0.60
%ile	86.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	68.8	0.99	1617845_at	CD800649	hypothetical protein LOC100263968	-	4e-35	At2g38630	-	O.I.	H.G.	S.X.	Please select
0.70	88.6	0.99	1614710_at	CF404864	-	-	1e-1	At1g53625	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1615901_at	CF405787	hypothetical protein LOC100248277	-	5e+0	At4g13075	RALFL30 (RALF-LIKE 30)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.99	1613129_at	CB970410	hypothetical protein LOC100266068	-	2e-13	At4g17330	ATG2484-1	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.99	1611483_at	CF207449	hypothetical protein LOC100253154	-	7e+0	Atmg00320	-	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.99	1607726_at	CB349094	hypothetical protein LOC100262331	-	8e-25	At4g34100	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1615281_at	CD800042	hypothetical protein LOC100241659	-	2e-17	At3g26560	ATP-dependent RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1608089_at	BQ796412	hypothetical protein LOC100242497	-	8e-9	At3g63080	ATGPX5 (glutathione peroxidase 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.4	91.3	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.3	90.7	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
2.3	90.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.1	89.1	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.0	88.2	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.9	87.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.9	87.2	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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