Co-expression analysis

Gene ID	1617835_at
Gene name
Homology with Arabidopsis	Similar to At3g46180: UTR5 (UDP-GALACTOSE TRANSPORTER 5) (HF=3e-1)
Module size	6 genes
NF	0.13
%ile	21.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.94	1617835_at	CF206111.1	-	-	3e-1	At3g46180	UTR5 (UDP-GALACTOSE TRANSPORTER 5)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1608215_s_at	CF206111.1	hypothetical protein LOC100250736	-	3e-1	At3g46180	UTR5 (UDP-GALACTOSE TRANSPORTER 5)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.95	1607359_s_at	BQ797168	hypothetical protein LOC100247960 /// hypothetical protein LOC100253084 /// hypothetical protein LOC100256782	-	1e+0	At5g51845	-	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.96	1609623_at	CF214621	hypothetical protein LOC100245401	-	2e+0	At5g54870	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.96	1611001_at	CF204537.1	-	-	7e-12	At2g26600	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.96	1613772_s_at	BQ792569	hypothetical protein LOC100241957	-	6e-27	At5g43060	cysteine proteinase, putative / thiol protease, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.4	95.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.5	91.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.5	91.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.4	91.3	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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