Co-expression analysis

Gene ID 1617831_at
Gene name hypothetical protein LOC100262207
Homology with ArabidopsisSimilar to At2g27470: NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11) (HF=2e-6)
Module size 8 genes
NF 0.23
%ile 33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.961617831_atCA813852hypothetical protein LOC100262207-2e-6At2g27470NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)O.I.H.G.S.X.
0.4260.10.971616087_atBQ799965hypothetical protein LOC100259924-2e+0At5g24310ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)O.I.H.G.S.X.
0.3345.70.981615696_atCB348585hypothetical protein LOC100251498-1e+0At2g259103'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing proteinO.I.H.G.S.X.
0.2327.50.971620458_atBQ795444hypothetical protein LOC100266069-4e+0At3g23650protein kinase-relatedO.I.H.G.S.X.
0.2225.60.981611321_atBQ792642hypothetical protein LOC100255474-1e+0At4g19985GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.1515.60.971617306_atCA808681similar to VPS24.1-2e-79At5g22950VPS24.1O.I.H.G.S.X.
0.1313.30.971615686_atCB970414hypothetical protein LOC100261219-5e-32At1g48900signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C)O.I.H.G.S.X.
0.1313.30.971620978_atCF405834hypothetical protein LOC100243157-3e-62At2g03120ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.696.0GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.696.0GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.793.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.793.0GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.491.3GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
2.390.7GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage