Co-expression analysis

Gene ID 1617829_at
Gene name hypothetical protein LOC100244817
Homology with ArabidopsisSimilar to At5g60800: heavy-metal-associated domain-containing protein (HF=9e-2)
Module size 7 genes
NF 0.32
%ile 45.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.941617829_atCF215141hypothetical protein LOC100244817-9e-2At5g60800heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5577.30.951617272_atCF518232zinc finger RING-type protein-like-1e-3At3g54780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3853.60.951619038_atBQ800482hypothetical protein LOC100259975-5e-12At4g26510ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferaseO.I.H.G.S.X.
0.3548.50.951612860_atCF210174hypothetical protein LOC100261292-4e-54At3g22950ATARFC1 (ADP-ribosylation factor C1)O.I.H.G.S.X.
0.2734.00.951613210_atCB970149hypothetical protein LOC100258607-4e-50At3g08720S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2)O.I.H.G.S.X.
0.2124.00.941620014_atCF210422hypothetical protein LOC100261066-3e-13At2g43340unknown proteinO.I.H.G.S.X.
0.1718.20.941621047_atCB968782--1e+0At1g71050heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.194.6GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.993.8GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.893.4GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.793.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.793.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.491.3GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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