Co-expression analysis

Gene ID	1617829_at
Gene name	hypothetical protein LOC100244817
Homology with Arabidopsis	Similar to At5g60800: heavy-metal-associated domain-containing protein (HF=9e-2)
Module size	7 genes
NF	0.32
%ile	45.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.94	1617829_at	CF215141	hypothetical protein LOC100244817	-	9e-2	At5g60800	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.95	1617272_at	CF518232	zinc finger RING-type protein-like	-	1e-3	At3g54780	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.95	1619038_at	BQ800482	hypothetical protein LOC100259975	-	5e-12	At4g26510	ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.95	1612860_at	CF210174	hypothetical protein LOC100261292	-	4e-54	At3g22950	ATARFC1 (ADP-ribosylation factor C1)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.95	1613210_at	CB970149	hypothetical protein LOC100258607	-	4e-50	At3g08720	S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.94	1620014_at	CF210422	hypothetical protein LOC100261066	-	3e-13	At2g43340	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.94	1621047_at	CB968782	-	-	1e+0	At1g71050	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.1	94.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.9	93.8	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.8	93.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.7	93.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.4	91.3	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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