Co-expression analysis

Gene ID	1617827_at
Gene name	hypothetical protein LOC100253774
Homology with Arabidopsis	Similar to At1g15120: ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative (HF=2e-8)
Module size	7 genes
NF	0.75
%ile	96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.99	1617827_at	BQ792603	hypothetical protein LOC100253774	-	2e-8	At1g15120	ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative	O.I.	H.G.	S.X.	Please select
0.86	95.1	0.99	1620495_at	CA812269	hypothetical protein LOC100255760	-	5e-9	At1g67350	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.99	1620417_at	CA817150	-	-	1e-19	At2g29530	mitochondrial import inner membrane translocase (TIM10)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1611461_at	BQ792825	hypothetical protein LOC100246984	-	1e-37	At4g34700	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1620467_s_at	CA817782	hypothetical protein LOC100250756	-	2e-9	At1g49140	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.99	1622214_at	BQ794441	similar to NADH-ubiquinone oxidoreductase-related	-	5e-43	At3g62790	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1606896_at	CA815281	hypothetical protein LOC100251845	-	1e-6	At4g21105	cytochrome-c oxidase/ electron carrier	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.0	88.2	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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