Co-expression analysis

Gene ID 1617743_at
Gene name
Homology with ArabidopsisSimilar to At1g52870: peroxisomal membrane protein-related (HF=2e-12)
Module size 6 genes
NF 0.86
%ile 99.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961617743_atCF201643.1--2e-12At1g52870peroxisomal membrane protein-relatedO.I.H.G.S.X.
0.9198.80.921609224_atCF203372.1--4e+0At5g54745DegP protease familyO.I.H.G.S.X.
0.8394.60.951611368_atCF203753.1--6e-18At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.8093.60.971618231_atAF141642.1--8e-50At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.6787.90.951617744_x_atCF205571.1--2e+0At1g03660-O.I.H.G.S.X.
0.6183.20.961616794_atCF205534.1--3e-26At3g58680MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.9GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.896.4GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.495.5GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436400V. riparia (VR, PI588259) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147703Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation32Link to GEO
2.591.9GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436407V. riparia (VR, PI588259) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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