Co-expression analysis

Gene ID	1617694_at
Gene name	hypothetical protein LOC100260852
Homology with Arabidopsis	Similar to At2g20570: GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1) (HF=1e-28)
Module size	6 genes
NF	0.38
%ile	55.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.95	1617694_at	CB972462	hypothetical protein LOC100260852	-	1e-28	At2g20570	GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1615159_s_at	CD711821	similar to nitrate reductase	-	3e-26	At1g37130	NIA2 (NITRATE REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1614851_s_at	CB973279	hypothetical protein LOC100260852	-	8e+0	At5g65650	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1619418_at	CF372340	hypothetical protein LOC100262138	-	2e+1	At4g30410	transcription factor	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.95	1607673_at	CF405158	hypothetical protein LOC100258964	-	2e-60	At5g13630	GUN5 (GENOMES UNCOUPLED 5)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1606996_s_at	CA817527	hypothetical protein LOC100254512	-	1e-4	At2g05620	PGR5 (proton gradient regulation 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.8	93.4	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.5	91.9	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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