Co-expression analysis

Gene ID 1617637_at
Gene name hypothetical protein LOC100245010
Homology with ArabidopsisSimilar to At1g20220: nucleic acid binding (HF=1e-3)
Module size 6 genes
NF 0.12
%ile 19.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.50.951617637_atCB974429hypothetical protein LOC100245010-1e-3At1g20220nucleic acid bindingO.I.H.G.S.X.
0.6081.90.961614636_atCF211282hypothetical protein LOC100243893-4e-41At5g20490XIKO.I.H.G.S.X.
0.3650.70.951618531_atCB917754hypothetical protein LOC100241327-2e+0At5g10160beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.1718.20.961607704_atAF488697.1serine/threonine kinase-like-2e-18At1g12310calmodulin, putativeO.I.H.G.S.X.
0.077.80.961611833_atCB005444hypothetical protein LOC100256245-5e+0At2g01590CRR3 (CHLORORESPIRATORY REDUCTION 3)O.I.H.G.S.X.
0.045.20.951617805_atCD013683hypothetical protein LOC100254609-1e-13At1g12470Pep3/Vps18/deep orange family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.896.4GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.796.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.495.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.395.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
2.793.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.793.0GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.692.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.692.5GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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