Co-expression analysis

Gene ID 1617607_at
Gene name
Homology with ArabidopsisSimilar to At4g17090: CT-BMY (CHLOROPLAST BETA-AMYLASE) (HF=3e-2)
Module size 6 genes
NF 0.37
%ile 54.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.961617607_atCB918932--3e-2At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)O.I.H.G.S.X.
0.4464.10.951617721_atCF568847--1e-76At5g56030HSP81-2 (HEAT SHOCK PROTEIN 81-2)O.I.H.G.S.X.
0.3853.60.961613291_atCF972323.1--4e-4At3g13410unknown proteinO.I.H.G.S.X.
0.3345.70.951606450_atCD712784--2e-12At3g20560ATPDIL5-3 (PDI-LIKE 5-3)O.I.H.G.S.X.
0.2937.70.951619724_atCA818237--1e-23At5g27640TIF3B1 (TRANSLATION INITIATION FACTOR 3B1)O.I.H.G.S.X.
0.1819.40.961621365_atCK136934.1--9e-69At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.692.5GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO
2.591.9GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.591.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9Link to GEO
2.289.9GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
2.189.1GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.189.1GSM147703Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation32Link to GEO
2.088.2GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.088.2GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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