Co-expression analysis

Gene ID	1617589_at
Gene name	hypothetical protein LOC100251624
Homology with Arabidopsis	Similar to At5g17710: EMB1241 (embryo defective 1241) (HF=4e+0)
Module size	6 genes
NF	0.18
%ile	26.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.82	1617589_at	CF213123	hypothetical protein LOC100251624	-	4e+0	At5g17710	EMB1241 (embryo defective 1241)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.82	1614975_at	CD799759	hypothetical protein LOC100264828	-	2e-1	At5g14440	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.85	1606514_at	CD799006	hypothetical protein LOC100256196	-	3e-4	At4g10265	wound-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.84	1607146_at	CK138255.1	hypothetical LOC100266416	-	8e-2	At1g13550	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.83	1614502_at	CF213530	hypothetical protein LOC100267863	-	2e-19	At4g36220	FAH1 (FERULIC ACID 5-HYDROXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.78	1611611_at	CB980376	hypothetical protein LOC100259980	-	1e-1	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	98.1	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.4	95.5	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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