Co-expression analysis

Gene ID	1617557_at
Gene name	hypothetical protein LOC100255856
Homology with Arabidopsis	Similar to At1g75110: RRA2 (REDUCED RESIDUAL ARABINOSE 2) (HF=3e-7)
Module size	21 genes
NF	0.43
%ile	63.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	91.5	0.98	1617557_at	CB981480	hypothetical protein LOC100255856	-	3e-7	At1g75110	RRA2 (REDUCED RESIDUAL ARABINOSE 2)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1618002_s_at	CB340753	hypothetical protein LOC100260795	-	3e-48	At2g27030	CAM5 (CALMODULIN 5)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.99	1614904_at	CF372909	hypothetical protein LOC100250638	-	4e-16	At3g61140	FUS6 (FUSCA 6)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1612977_at	CF204464.1	hypothetical protein LOC100266745	-	5e-53	At3g60250	CKB3	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1622788_at	CB920325	hypothetical protein LOC100262286	-	1e-1	At3g15355	UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)	O.I.	H.G.	S.X.	Please select
0.51	73.2	0.99	1619907_at	BQ793230	similar to 26S proteasome subunit RPN5b	-	3e-26	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1619211_s_at	CD798358	hypothetical protein LOC100256723	-	6e-47	At1g17730	VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.99	1619569_at	CF211443	hypothetical protein LOC100250036	-	2e-30	At2g26590	adhesion regulating molecule family	O.I.	H.G.	S.X.	Please select
0.45	64.6	0.99	1607141_at	CD712648	hypothetical protein LOC100254376	-	1e-77	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1614323_s_at	CB973766	hypothetical protein LOC100245498	-	1e-22	At3g58680	MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1622714_at	BQ796372	hypothetical protein LOC100254120	-	2e-12	At2g30880	pleckstrin homology (PH) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.98	1611040_at	BQ794523	hypothetical protein LOC100263053	-	3e-7	At1g65020	-	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.99	1608865_at	CF514121	hypothetical protein LOC100259987	-	7e-90	At5g38480	GRF3 (GENERAL REGULATORY FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.99	1610278_s_at	CA817273	hypothetical protein LOC100259495	-	5e-38	At4g33250	EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K)	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.99	1611523_at	CD801109	hypothetical protein LOC100267138	-	6e-16	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1620740_s_at	BQ796880	hypothetical protein LOC100250299	-	5e-36	At5g66680	DGL1	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1616088_at	CB979585	-	-	1e-48	At5g58060	YKT61	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.99	1611670_at	BQ797758	hypothetical protein LOC100241885	-	9e-70	At5g54750	transport protein particle (TRAPP) component Bet3, putative	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1620587_at	CF373296	hypothetical protein LOC100258035	-	2e-2	At1g08970	NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1612039_at	BQ799884	hypothetical protein LOC100266651	-	1e-18	At2g03870	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1612909_at	CF404929	hypothetical protein LOC100264659	-	3e-8	At3g28970	AAR3 (antiauxin-resistant 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.7	93.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.6	92.5	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.2	89.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.1	89.1	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.0	88.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.0	88.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.0	88.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.0	88.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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