Co-expression analysis

Gene ID 1617552_at
Gene name hypothetical protein LOC100243817
Homology with ArabidopsisSimilar to At4g35020: ARAC3 (ARABIDOPSIS RAC-LIKE 3) (HF=4e-35)
Module size 6 genes
NF 0.68
%ile 93.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971617552_atCF202269.1hypothetical protein LOC100243817-4e-35At4g35020ARAC3 (ARABIDOPSIS RAC-LIKE 3)O.I.H.G.S.X.
0.6787.90.971621770_atCB978874--1e+0At1g10030ERG28 (Arabidopsis homolog of yeast ergosterol28)O.I.H.G.S.X.
0.6787.90.971621992_s_atBQ793824hypothetical protein LOC100259183-2e-11At5g66290unknown proteinO.I.H.G.S.X.
0.5072.70.981607612_atCF202447.1hypothetical protein LOC100262044-2e-12At4g31300PBA1O.I.H.G.S.X.
0.4666.50.981612717_s_atCA814430hypothetical protein LOC100259033-1e+0At1g01225NC domain-containing protein-relatedO.I.H.G.S.X.
0.4464.10.971621019_atCF201902.1--1e+0At5g65360histone H3O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.096.7GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.896.4GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.796.2GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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